- generateLabel() - Method in class org.micromanager.api.PositionList
-
Helper method to generate unique label when inserting a new position.
- generateLabel(String) - Method in class org.micromanager.api.PositionList
-
- get(int) - Method in class org.micromanager.api.MultiStagePosition
-
Return stage position based on index
- get(String) - Method in class org.micromanager.api.MultiStagePosition
-
Returns position for a specific stage.
- getAcqDlg() - Method in interface org.micromanager.api.ScriptInterface
-
- getAcquisition(String) - Method in interface org.micromanager.api.ScriptInterface
-
- getAcquisitionEngine2010() - Method in interface org.micromanager.api.ScriptInterface
-
- getAcquisitionImageBitDepth(String) - Method in interface org.micromanager.api.ScriptInterface
-
Returns the number of bits used per pixel
- getAcquisitionImageByteDepth(String) - Method in interface org.micromanager.api.ScriptInterface
-
Returns the number of bytes used per pixel
- getAcquisitionImageCache(String) - Method in interface org.micromanager.api.ScriptInterface
-
Get a reference to the ImageCache object associated with the acquisition.
- getAcquisitionImageHeight(String) - Method in interface org.micromanager.api.ScriptInterface
-
Returns the width (in pixels) of images in this acquisition
- getAcquisitionImageWidth(String) - Method in interface org.micromanager.api.ScriptInterface
-
Returns the width (in pixels) of images in this acquisition
- getAcquisitionMultiCamNumChannels(String) - Method in interface org.micromanager.api.ScriptInterface
-
Returns boolean specifying whether multiple cameras used in this acquisition
- getAcquisitionNames() - Method in interface org.micromanager.api.ScriptInterface
-
Gets an Array with names of all open acquisitions
- getAcquisitionPath() - Method in interface org.micromanager.api.ScriptInterface
-
Return the current acquisition path, or null if not applicable
- getAcquisitionSettings() - Method in interface org.micromanager.api.ScriptInterface
-
Return current acquisition settings
- getAutofocus() - Method in interface org.micromanager.api.ScriptInterface
-
Currently active autofocus device (can be either a Java or C++ coded device).
- getAutofocusManager() - Method in interface org.micromanager.api.ScriptInterface
-
- getBackgroundColor() - Method in interface org.micromanager.api.ScriptInterface
-
Returns the current color of the main window so that it can be used in
derived windows/plugins as well
- getBackgroundStyle() - Method in interface org.micromanager.api.ScriptInterface
-
- getBitDepth() - Method in interface org.micromanager.api.ImageCache
-
Returns the bit depth of all images in the image cache.
- getCacheForWindow(ImageWindow) - Method in interface org.micromanager.api.ScriptInterface
-
Given an ImageWindow, return the ImageCache associated with it.
- getCameraName() - Method in class org.micromanager.api.events.ExposureChangedEvent
-
- getChangingKeys() - Method in interface org.micromanager.api.ImageCache
-
Get a list of keys that are not identical for every TaggedImage.
- getChannelColor(int) - Method in interface org.micromanager.api.ImageCache
-
Returns the preferred display color for a channel, specified by channelIndex.
- getChannelExposureTime(String, String, double) - Method in interface org.micromanager.api.ScriptInterface
-
Returns exposure time for the desired preset in the given channelgroup
Acquires its info from the preferences
Same thing is used in MDA window, but this class keeps its own copy
- getChannelGamma(int) - Method in interface org.micromanager.api.ImageCache
-
Returns the gamma for the channel display.
- getChannelHistogramMax(int) - Method in interface org.micromanager.api.ImageCache
-
Returns the preferred maximum value for the channel's histogram.
- getChannelMax(int) - Method in interface org.micromanager.api.ImageCache
-
Gets the maximum intensity value for a channel display (typically shown
as full intensity color).
- getChannelMin(int) - Method in interface org.micromanager.api.ImageCache
-
Gets the minimum intensity value for a channel display (typically shown
as black).
- getChannelName(int) - Method in interface org.micromanager.api.ImageCache
-
Returns the name of a channel specified by channelIndex.
- getChannelSetting(int) - Method in interface org.micromanager.api.ImageCache
-
Returns a JSONObject with channel settings for the channel whose index
is the argument.
- getComment() - Method in interface org.micromanager.api.ImageCache
-
Gets the overall comment string for this data set.
- getCopyright() - Method in interface org.micromanager.api.MMBasePlugin
-
Returns copyright information
- getCurrentAlbum() - Method in interface org.micromanager.api.ScriptInterface
-
Returns the name of the current album (i.e.
- getCurrentFocusScore() - Method in interface org.micromanager.api.Autofocus
-
- getDataSetSize() - Method in interface org.micromanager.api.TaggedImageStorage
-
- getDefaultXYStage() - Method in class org.micromanager.api.MultiStagePosition
-
- getDefaultZStage() - Method in class org.micromanager.api.MultiStagePosition
-
- getDescription() - Method in interface org.micromanager.api.MMBasePlugin
-
Returns a very short (few words) description of the module.
- getDevice() - Method in class org.micromanager.api.events.PropertyChangedEvent
-
- getDeviceName() - Method in interface org.micromanager.api.Autofocus
-
- getDeviceName() - Method in class org.micromanager.api.events.SLMExposureChangedEvent
-
- getDeviceName() - Method in class org.micromanager.api.events.StagePositionChangedEvent
-
- getDeviceName() - Method in class org.micromanager.api.events.XYStagePositionChangedEvent
-
- getDiskLocation() - Method in interface org.micromanager.api.TaggedImageStorage
-
- getDisplayAndComments() - Method in interface org.micromanager.api.TaggedImageStorage
-
- getDisplayMode() - Method in interface org.micromanager.api.ImageCache
-
Returns the display mode used by the CompositeImage (composite, color, or grayscale)
- getGridColumn() - Method in class org.micromanager.api.MultiStagePosition
-
Returns rectangular grid column.
- getGridRow() - Method in class org.micromanager.api.MultiStagePosition
-
Returns rectangular grid row.
- getGroupName() - Method in class org.micromanager.api.events.ConfigGroupChangedEvent
-
- getHideMDADisplayOption() - Method in interface org.micromanager.api.ScriptInterface
-
- getImage(int, int, int, int) - Method in interface org.micromanager.api.ImageCache
-
Return the TaggedImage at the specified coordinates, or null if that
image does not exist.
- getImage(int, int, int, int) - Method in interface org.micromanager.api.TaggedImageStorage
-
- getImageCacheListeners() - Method in interface org.micromanager.api.ImageCache
-
Gets a list of image cache listeners.
- getImageComment(JSONObject) - Method in interface org.micromanager.api.ImageCache
-
Returns the image comment for a particular image.
- getImageMetadata(int, int, int, int) - Method in class org.micromanager.api.MMWindow
-
Note: this function is preliminary.
- getImagePlus(int) - Method in class org.micromanager.api.MMWindow
-
Returns an ImageJ ImagePlus for a given position
Does not update the display
- getImageProcessor(int, int, int, int) - Method in class org.micromanager.api.MMWindow
-
- getImageProcessorPipeline() - Method in interface org.micromanager.api.ScriptInterface
-
Retrieve a copy of the current DataProcessor pipeline.
- getImageTags(int, int, int, int) - Method in interface org.micromanager.api.TaggedImageStorage
-
- getInfo() - Method in interface org.micromanager.api.MMBasePlugin
-
Returns verbose information about the module.
- getIsEnabled() - Method in class org.micromanager.api.DataProcessor
-
Get whether or not this Processor is enabled.
- getIsOpen() - Method in interface org.micromanager.api.ImageCache
-
Return true if the ImageCache is still valid, false otherwise.
- getLabel() - Method in class org.micromanager.api.MultiStagePosition
-
Returns position label.
- getLastImageTags() - Method in interface org.micromanager.api.ImageCache
-
Returns the image tags for the last received image.
- getMMCore() - Method in interface org.micromanager.api.ScriptInterface
-
Provides access to the Core and its functionality.
- getNewConfig() - Method in class org.micromanager.api.events.ConfigGroupChangedEvent
-
- getNewExposureTime() - Method in class org.micromanager.api.events.ExposureChangedEvent
-
- getNewExposureTime() - Method in class org.micromanager.api.events.SLMExposureChangedEvent
-
- getNewPixelSizeUm() - Method in class org.micromanager.api.events.PixelSizeChangedEvent
-
- getNumberOfChannels() - Method in class org.micromanager.api.MMWindow
-
- getNumberOfFrames() - Method in class org.micromanager.api.MMWindow
-
- getNumberOfImages() - Method in interface org.micromanager.api.Autofocus
-
- getNumberOfPositions() - Method in class org.micromanager.api.MMWindow
-
- getNumberOfPositions() - Method in class org.micromanager.api.PositionList
-
Returns the number of positions contained within the list
- getNumberOfSlices() - Method in class org.micromanager.api.MMWindow
-
- getNumDisplayChannels() - Method in interface org.micromanager.api.ImageCache
-
Returns the number of channels in the ImageCache.
- getPixelType() - Method in interface org.micromanager.api.ImageCache
-
Returns the pixel type for images in this image cache.
- getPos() - Method in class org.micromanager.api.events.StagePositionChangedEvent
-
- getPosition() - Method in class org.micromanager.api.MMWindow
-
Returns the current position of the image viewer
Positions are 1-based
- getPosition(int) - Method in class org.micromanager.api.PositionList
-
Returns multi-stage position associated with the position index.
- getPositionCopy(int) - Method in class org.micromanager.api.PositionList
-
Returns a copy of the multi-stage position associated with the position index.
- getPositionIndex(String) - Method in class org.micromanager.api.PositionList
-
Returns position index associated with the position name.
- getPositionList() - Method in interface org.micromanager.api.ScriptInterface
-
Returns a copy of the current PositionList, the one used by the Acquisition Protocol
- getPositions() - Method in class org.micromanager.api.PositionList
-
Returns an array of positions contained in the list.
- getProperties() - Method in interface org.micromanager.api.Autofocus
-
- getProperty(String) - Method in interface org.micromanager.api.Autofocus
-
- getProperty() - Method in class org.micromanager.api.events.PropertyChangedEvent
-
- getProperty(String) - Method in class org.micromanager.api.MultiStagePosition
-
Returns property value for a given key (name)
- getPropertyNames() - Method in interface org.micromanager.api.Autofocus
-
- getPropertyNames() - Method in class org.micromanager.api.MultiStagePosition
-
Return the array of property keys (names) associated with this position
- getPropertyValue(String) - Method in interface org.micromanager.api.Autofocus
-
- getROI() - Method in interface org.micromanager.api.ScriptInterface
-
Get the default camera's ROI -- a convenience function.
- getSnapLiveWin() - Method in interface org.micromanager.api.ScriptInterface
-
Returns the ImageJ ImageWindow instance that is used for Snap and Live display.
- getSummaryMetadata() - Method in interface org.micromanager.api.IAcquisitionEngine2010
-
- getSummaryMetaData() - Method in class org.micromanager.api.MMWindow
-
Note: this function is preliminary.
- getSummaryMetadata() - Method in interface org.micromanager.api.TaggedImageStorage
-
- getTaggedImage(int, int, int, int) - Method in class org.micromanager.api.MMWindow
-
- getUniqueAcquisitionName(String) - Method in interface org.micromanager.api.ScriptInterface
-
Returns a name beginning with stem that is not yet used.
- getValue() - Method in class org.micromanager.api.events.PropertyChangedEvent
-
- getVerbose() - Method in class org.micromanager.api.StagePosition
-
- getVerboseStatus() - Method in interface org.micromanager.api.Autofocus
-
- getVersion() - Method in interface org.micromanager.api.MMBasePlugin
-
Returns version string for the module.
- getVersion() - Method in interface org.micromanager.api.ScriptInterface
-
- getX() - Method in class org.micromanager.api.MultiStagePosition
-
Returns "X" coordinate of the position.
- getXPos() - Method in class org.micromanager.api.events.XYStagePositionChangedEvent
-
- getXYPosListDlg() - Method in interface org.micromanager.api.ScriptInterface
-
- getXYStageName() - Method in interface org.micromanager.api.ScriptInterface
-
There can be multiple XY stage devices in a system.
- getXYStagePosition() - Method in interface org.micromanager.api.ScriptInterface
-
Obtain the current XY stage position.
- getY() - Method in class org.micromanager.api.MultiStagePosition
-
Returns "Y" coordinate of the position.
- getYPos() - Method in class org.micromanager.api.events.XYStagePositionChangedEvent
-
- getZ() - Method in class org.micromanager.api.MultiStagePosition
-
Returns "Z" - focus coordinate of the position.
- goToPosition(MultiStagePosition, CMMCore) - Static method in class org.micromanager.api.MultiStagePosition
-
Moves all stages to the specified positions.
- refreshGUI() - Method in interface org.micromanager.api.ScriptInterface
-
Brings GUI up to date with the recent changes in the mmcore.
- refreshGUIFromCache() - Method in interface org.micromanager.api.ScriptInterface
-
Brings GUI up to date with the recent changes in the mmcore.
- registerForEvents(Object) - Method in interface org.micromanager.api.ScriptInterface
-
Request that the given object be added to our EventBus for notification
of events occurring.
- registerProcessorClass(Class<? extends DataProcessor<TaggedImage>>, String) - Method in interface org.micromanager.api.ScriptInterface
-
Register a new DataProcessor class with the Acquisition Engine.
- relativeZSlice - Variable in class org.micromanager.api.SequenceSettings
-
- remove(StagePosition) - Method in class org.micromanager.api.MultiStagePosition
-
- removeChangeListener(ChangeListener) - Method in class org.micromanager.api.PositionList
-
- removeImageCacheListener(ImageCacheListener) - Method in interface org.micromanager.api.ImageCache
-
Removes an imageCacheListener so that it will no longer be notified
of relevant events.
- removeImageProcessor(DataProcessor<TaggedImage>) - Method in interface org.micromanager.api.ScriptInterface
-
Removes an image processor from the DataProcessor pipeline.
- removeMMBackgroundListener(Component) - Method in interface org.micromanager.api.ScriptInterface
-
Lets Components remove themselves from the list whose background gets
changed by the Micro-Manager UI.
- removeMMListener(MMListenerInterface) - Method in interface org.micromanager.api.ScriptInterface
-
Allows MMListeners to remove themselves
- removePosition(int) - Method in class org.micromanager.api.PositionList
-
Removes a specific position based on the index
- replacePosition(int, MultiStagePosition) - Method in class org.micromanager.api.PositionList
-
Replaces position in the list with the new position
- requestStop() - Method in class org.micromanager.api.DataProcessor
-
Request that the data processor stop processing.
- restore(String) - Method in class org.micromanager.api.PositionList
-
Restore object data from the JSON encoded stream.
- resume() - Method in interface org.micromanager.api.IAcquisitionEngine2010
-
- Root() - Constructor for class org.micromanager.api.MMTags.Root
-
- root - Variable in class org.micromanager.api.SequenceSettings
-
- run() - Method in class org.micromanager.api.DataProcessor
-
The run method that causes images to be processed.
- run(SequenceSettings) - Method in interface org.micromanager.api.IAcquisitionEngine2010
-
- run(SequenceSettings, boolean, PositionList, Autofocus) - Method in interface org.micromanager.api.IAcquisitionEngine2010
-
- run(SequenceSettings, boolean) - Method in interface org.micromanager.api.IAcquisitionEngine2010
-
- runAcquisition() - Method in interface org.micromanager.api.ScriptInterface
-
Executes Acquisition with current settings
Will open the Acquisition Dialog when it is not open yet
Returns after Acquisition finishes
Note that this function should not be executed on the EDT (which is the
thread running the UI).
- runAcquisition(String, String) - Method in interface org.micromanager.api.ScriptInterface
-
Executes Acquisition with current settings but allows for changing the data path.
- save(String) - Method in class org.micromanager.api.PositionList
-
Save list to a file.
- save - Variable in class org.micromanager.api.SequenceSettings
-
- saveAs(TaggedImageStorage) - Method in interface org.micromanager.api.ImageCache
-
Save a new copy of a TaggedImage data set, stored in a TaggedImageStorage
object.
- saveAs(TaggedImageStorage, boolean) - Method in interface org.micromanager.api.ImageCache
-
Save a new copy of a TaggedImage data set, stored in a TaggedImageStorage
object.
- saveConfigPresets() - Method in interface org.micromanager.api.ScriptInterface
-
Save current configuration
- saveSettings() - Method in interface org.micromanager.api.Autofocus
-
- ScriptInterface - Interface in org.micromanager.api
-
Interface to execute commands in the main panel.
- SequenceSettings - Class in org.micromanager.api
-
- SequenceSettings() - Constructor for class org.micromanager.api.SequenceSettings
-
- serialize() - Method in class org.micromanager.api.PositionList
-
Serialize object into the JSON encoded stream.
- setAcquisitionAddImageAsynchronous(String) - Method in interface org.micromanager.api.ScriptInterface
-
Change an acquisition so that adding images to it is done asynchronously.
- setAcquisitionProperty(String, String, String) - Method in interface org.micromanager.api.ScriptInterface
-
Sets custom property attached to the acquisition summary
- setAcquisitionSettings(SequenceSettings) - Method in interface org.micromanager.api.ScriptInterface
-
Apply new acquisition settings
- setApp(ScriptInterface) - Method in interface org.micromanager.api.Autofocus
-
- setApp(ScriptInterface) - Method in class org.micromanager.api.DataProcessor
-
Receive the ScriptInterface object.
- setApp(ScriptInterface) - Method in interface org.micromanager.api.MMPlugin
-
The main app passes its ScriptInterface to the module.
- setBackgroundStyle(String) - Method in interface org.micromanager.api.ScriptInterface
-
Sets the background color of the GUI and all its registered components to
the selected backGroundType
- setChannelColor(int, int) - Method in interface org.micromanager.api.ImageCache
-
Sets the preferred display color for a channel
- setChannelColor(String, int, Color) - Method in interface org.micromanager.api.ScriptInterface
-
Sets the color of the specified channel in the image viewer.
- setChannelContrast(String, int, int, int) - Method in interface org.micromanager.api.ScriptInterface
-
Sets min (black) and max (white or the channel's color) pixel value clipping levels for each channel.
- setChannelExposureTime(String, String, double) - Method in interface org.micromanager.api.ScriptInterface
-
Updates the exposure time associated with the given preset
If the channelgroup and channel name match the current state
the exposure time will also be updated
- setChannelName(String, int, String) - Method in interface org.micromanager.api.ScriptInterface
-
Sets the channel name (label)
- setComment(String) - Method in interface org.micromanager.api.ImageCache
-
Set the data set's comment string for this image cache.
- setConfigChanged(boolean) - Method in interface org.micromanager.api.ScriptInterface
-
lets the GUI know that the current configuration has been changed.
- setContrastBasedOnFrame(String, int, int) - Method in interface org.micromanager.api.ScriptInterface
-
Autoscales contrast for each channel at the current position based on pixel values
at the current slice and frame
- setDefaultXYStage(String) - Method in class org.micromanager.api.MultiStagePosition
-
Defines which stage serves as the XY motion control device
- setDefaultZStage(String) - Method in class org.micromanager.api.MultiStagePosition
-
Defines which stage serves as focus control
- setDisplayAndComments(JSONObject) - Method in interface org.micromanager.api.TaggedImageStorage
-
- setEnabled(boolean) - Method in class org.micromanager.api.DataProcessor
-
Turn the Processor on or off.
- setGridCoordinates(int, int) - Method in class org.micromanager.api.MultiStagePosition
-
Sets grid parameters for the rectangular grid
- setImageComment(String, JSONObject) - Method in interface org.micromanager.api.ImageCache
-
Set the comment string for an individual image.
- setImageProcessorPipeline(List<DataProcessor<TaggedImage>>) - Method in interface org.micromanager.api.ScriptInterface
-
Replace the current DataProcessor pipeline with the provided one.
- setImageProperty(String, int, int, int, String, String) - Method in interface org.micromanager.api.ScriptInterface
-
Sets property attached to an individual image.
- setImageSavingFormat(Class) - Method in interface org.micromanager.api.ScriptInterface
-
Set the format for saving images to disk.
- setInput(BlockingQueue<E>) - Method in class org.micromanager.api.DataProcessor
-
Sets the input queue where objects to be processed
are received by the DataProcessor.
- setLabel(String) - Method in class org.micromanager.api.MultiStagePosition
-
Sets position label (such as well name, etc.)
- setLabel(int, String) - Method in class org.micromanager.api.PositionList
-
Assigns a label to the position index
- setOutput(BlockingQueue<E>) - Method in class org.micromanager.api.DataProcessor
-
Sets the output queue where objects that have been processed
exit the DataProcessor.
- setPause(boolean) - Method in interface org.micromanager.api.ScriptInterface
-
Pause/Unpause a running acquistion
- setPosition(int) - Method in class org.micromanager.api.MMWindow
-
Sets the display to the given position
Position are 1-based
- setPositionList(PositionList) - Method in interface org.micromanager.api.ScriptInterface
-
Makes this the 'current' PositionList, i.e., the one used by the Acquisition Protocol
Replaces the list in the PositionList Window
It will open a position list dialog if it was not already open.
- setPositions(MultiStagePosition[]) - Method in class org.micromanager.api.PositionList
-
Initialize the entire array by passing an array of multi-stage positions
- setProperty(PropertyItem) - Method in interface org.micromanager.api.Autofocus
-
- setProperty(String, String) - Method in class org.micromanager.api.MultiStagePosition
-
Add a generalized property-value par to the position.
- setPropertyValue(String, String) - Method in interface org.micromanager.api.Autofocus
-
- setRelativeStagePosition(double) - Method in interface org.micromanager.api.ScriptInterface
-
Move default Focus (Z) relative to current position and block until done
- setRelativeXYStagePosition(double, double) - Method in interface org.micromanager.api.ScriptInterface
-
Move default XY stage relative to current position and block until done.
- setROI(Rectangle) - Method in interface org.micromanager.api.ScriptInterface
-
Set the default camera's ROI -- a convenience function.
- setStagePosition(double) - Method in interface org.micromanager.api.ScriptInterface
-
Move default Focus (Z) and block until done
- setSummaryMetadata(JSONObject) - Method in interface org.micromanager.api.TaggedImageStorage
-
- setXYOrigin(double, double) - Method in interface org.micromanager.api.ScriptInterface
-
Assigns the current stage position of the default xy-stage to be (x,y),
thereby offseting the coordinates of all other positions.
- setXYStagePosition(double, double) - Method in interface org.micromanager.api.ScriptInterface
-
Move default XY stage and block until done.
- show() - Method in interface org.micromanager.api.MMPlugin
-
Open the module window
- showAutofocusDialog() - Method in interface org.micromanager.api.ScriptInterface
-
Shows the dialog with options for the currently active autofocus device.
- showError(Exception, String) - Method in interface org.micromanager.api.ScriptInterface
-
Shows an error in the UI and logs stacktrace to the Micro-Manager log.
- showError(Exception) - Method in interface org.micromanager.api.ScriptInterface
-
Shows and logs a Java exception.
- showError(String) - Method in interface org.micromanager.api.ScriptInterface
-
Shows an error message in the UI and logs to the Micro-Manager log.
- showError(Exception, String, Component) - Method in interface org.micromanager.api.ScriptInterface
-
Shows an error in the UI and logs stacktrace to the Micro-Manager log.
- showError(Exception, Component) - Method in interface org.micromanager.api.ScriptInterface
-
Shows and logs a Java exception.
- showError(String, Component) - Method in interface org.micromanager.api.ScriptInterface
-
Shows an error message in the UI and logs to the Micro-Manager log.
- showMessage(String) - Method in interface org.micromanager.api.ScriptInterface
-
Shows a message in the UI.
- showMessage(String, Component) - Method in interface org.micromanager.api.ScriptInterface
-
Shows a message in the UI.
- showXYPositionList() - Method in interface org.micromanager.api.ScriptInterface
-
shows the position list dialog
- size() - Method in class org.micromanager.api.MultiStagePosition
-
Number of stages.
- skipAutofocusCount - Variable in class org.micromanager.api.SequenceSettings
-
- sleep(long) - Method in interface org.micromanager.api.ScriptInterface
-
Request a pause in script execution for the specified number of
milliseconds.
- SLICE - Static variable in class org.micromanager.api.MMTags.Image
-
- SLICE_INDEX - Static variable in class org.micromanager.api.MMTags.Image
-
- SLICES - Static variable in class org.micromanager.api.MMTags.Summary
-
- slices - Variable in class org.micromanager.api.SequenceSettings
-
- SLICES_FIRST - Static variable in class org.micromanager.api.MMTags.Summary
-
- slicesFirst - Variable in class org.micromanager.api.SequenceSettings
-
- slmExposureChanged(String, double) - Method in interface org.micromanager.api.MMListenerInterface
-
Implement to be notified that the exposure time given camera has changed
- SLMExposureChangedEvent - Class in org.micromanager.api.events
-
- SLMExposureChangedEvent(String, double) - Constructor for class org.micromanager.api.events.SLMExposureChangedEvent
-
- snapAndAddImage(String, int, int, int, int) - Method in interface org.micromanager.api.ScriptInterface
-
Snaps an image with the current settings and places pixels in the specified position
of the Micro-Manager Image viewer
- snapSingleImage() - Method in interface org.micromanager.api.ScriptInterface
-
Snaps image and displays in AcqWindow.
- SOURCE - Static variable in class org.micromanager.api.MMTags.Summary
-
- stageName - Variable in class org.micromanager.api.StagePosition
-
- StagePosition - Class in org.micromanager.api
-
- StagePosition() - Constructor for class org.micromanager.api.StagePosition
-
- stagePositionChangedAlert(String, double) - Method in interface org.micromanager.api.MMListenerInterface
-
- StagePositionChangedEvent - Class in org.micromanager.api.events
-
- StagePositionChangedEvent(String, double) - Constructor for class org.micromanager.api.events.StagePositionChangedEvent
-
- stop() - Method in interface org.micromanager.api.IAcquisitionEngine2010
-
- stopHasBeenRequested() - Method in interface org.micromanager.api.IAcquisitionEngine2010
-
- storagePluginName - Static variable in interface org.micromanager.api.TaggedImageStorage
-
- storeChannelDisplaySettings(int, int, int, double, int, int) - Method in interface org.micromanager.api.ImageCache
-
Store the display settings for a particular channel.
- SUMMARY - Static variable in class org.micromanager.api.MMTags.Root
-
- Summary() - Constructor for class org.micromanager.api.MMTags.Summary
-
- systemConfigurationLoaded() - Method in interface org.micromanager.api.MMListenerInterface
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This function will be called when a configuration file is loaded
It can be used to stay informed of changes in the hardware configuration
Note that devices can be loaded an unloaded individually, in which case
this function will not be called
- SystemConfigurationLoadedEvent - Class in org.micromanager.api.events
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- SystemConfigurationLoadedEvent() - Constructor for class org.micromanager.api.events.SystemConfigurationLoadedEvent
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