Uses of Interface
org.micromanager.data.Datastore

Packages that use Datastore

Package	Description
org.micromanager	MMStudio application and Java API.
org.micromanager.acquisition	This package contains classes for acquiring data and accessing Micro- Manager's Acquisition Engine.
org.micromanager.data	This package contains classes related to the storage and internal representation of image data and metadata.
org.micromanager.display	This package contains classes related to Micro-Manager's display windows, which are used to show image data and metadata to the user.

Uses of Datastore in org.micromanager

Methods in org.micromanager that return Datastore

Modifier and Type	Method and Description
Datastore	Album.getDatastore() Return the Datastore that currently backs the Album.

Uses of Datastore in org.micromanager.acquisition

Methods in org.micromanager.acquisition that return Datastore

Modifier and Type	Method and Description
Datastore	AcquisitionStartedEvent.getDatastore() Return the Datastore into which images will be inserted during the acquisition.
Datastore	AcquisitionEndedEvent.getStore() Return the Datastore into which images were placed during the acquisition.
Datastore	AcquisitionManager.runAcquisition() Executes Acquisition with settings as in the MDA dialog.
Datastore	AcquisitionManager.runAcquisition(java.lang.String name, java.lang.String root) Executes Acquisition with current settings but allows for changing the data path.
Datastore	AcquisitionManager.runAcquisitionNonblocking() As runAcquisition, but will return as soon as the acquisition is set up and started; useful for code that wants access to the Datastore for the acquisition before it finishes.
Datastore	AcquisitionManager.runAcquisitionWithSettings(SequenceSettings settings, boolean shouldBlock) Execute an acquisition using the provided SequenceSettings.

Uses of Datastore in org.micromanager.data

Subinterfaces of Datastore in org.micromanager.data

Modifier and Type	Interface and Description
interface	RewritableDatastore RewritableDatastores are Datastores that allow images and SummaryMetadata to be deleted or overwritten after they have been inserted.

Methods in org.micromanager.data that return Datastore

Modifier and Type	Method and Description
Datastore	DataManager.createMultipageTIFFDatastore(Datastore storeToCopy, java.lang.String directory, boolean shouldGenerateSeparateMetadata, boolean shouldSplitPositions)
Datastore	DataManager.createMultipageTIFFDatastore(java.lang.String directory, boolean shouldGenerateSeparateMetadata, boolean shouldSplitPositions) Generate a new, "blank" Datastore with multipage TIFF-based Storage and return it.
Datastore	DataManager.createNDTIFFDatastore(Datastore storeToCopy, java.lang.String directory)
Datastore	DataManager.createNDTIFFDatastore(java.lang.String directory) Generate a new, "blank" Datastore with NDTIFF-based Storage and return it.
Datastore	DataManager.createRAMDatastore() Generate a new, "blank" Datastore with RAM-based Storage and return it.
Datastore	DataManager.createRAMDatastore(Datastore storeToCopy)
Datastore	DataManager.createSinglePlaneTIFFSeriesDatastore(Datastore storeToCopy, java.lang.String directory)
Datastore	DataManager.createSinglePlaneTIFFSeriesDatastore(java.lang.String directory) Generate a new, "blank" Datastore whose Storage is a series of single-plane TIFF files.
Datastore	DatastoreClosingEvent.getDatastore() Returns the Datastore that is closing.
Datastore	Pipeline.getDatastore() Get the output Datastore for this Pipeline.
Datastore	ImageOverwrittenEvent.getDatastore() Provides the Datastore this image was added to; potentially useful for code that listens to events from multiple Datastores.
Datastore	Annotation.getDatastore() Return the datastore to which this annotation is associated.
Datastore	ImageDeletedEvent.getDatastore() Provides the Datastore this image was added to; potentially useful for code that listens to events from multiple Datastores.
Datastore	DataManager.loadData(java.awt.Component parent, java.lang.String directory, boolean isVirtual) Load the image data at the specified location on disk, and return a Datastore for that data.
Datastore	DataManager.loadData(java.lang.String directory, boolean isVirtual) Load the image data at the specified location on disk, and return a Datastore for that data.
Datastore	DataManager.promptForDataToLoad(java.awt.Window parent, boolean isVirtual) Display a dialog prompting the user to select a location on disk, and invoke loadData() on that selection.

Methods in org.micromanager.data with parameters of type Datastore

Modifier and Type	Method and Description
Pipeline	DataManager.copyApplicationPipeline(Datastore store, boolean isSynchronous) Create a copy of the current application Pipeline as configured in the "Data Processing Pipeline" window.
Pipeline	DataManager.copyLivePipeline(Datastore store, boolean isSynchronous) Create a copy of the current Live Pipeline as configured in the "Data Processing Pipeline" window.
Datastore	DataManager.createMultipageTIFFDatastore(Datastore storeToCopy, java.lang.String directory, boolean shouldGenerateSeparateMetadata, boolean shouldSplitPositions)
Datastore	DataManager.createNDTIFFDatastore(Datastore storeToCopy, java.lang.String directory)
Pipeline	DataManager.createPipeline(java.util.List<ProcessorFactory> factories, Datastore store, boolean isSynchronous) Create a new Pipeline using the provided list of ProcessorFactories.
Datastore	DataManager.createRAMDatastore(Datastore storeToCopy)
RewritableDatastore	DataManager.createRewritableRAMDatastore(Datastore storeToCopy)
Datastore	DataManager.createSinglePlaneTIFFSeriesDatastore(Datastore storeToCopy, java.lang.String directory)

Uses of Datastore in org.micromanager.display

Methods in org.micromanager.display that return Datastore

Modifier and Type	Method and Description
Datastore	DataViewer.getDatastore() Deprecated. use DataViewer.getDataProvider() instead
Datastore	AbstractDataViewer.getDatastore() Deprecated. user code should call getDataProvider
Datastore	DisplayManager.show(Image image) Create a new Datastore with an associated DisplayWindow that will display the provided Image.

Methods in org.micromanager.display with parameters of type Datastore

Modifier and Type	Method and Description
java.util.List<DisplayWindow>	DisplayManager.getDisplays(Datastore store) Deprecated. replaced by DisplayManager.getDisplays(DataProvider)
java.util.List<DisplayWindow>	DisplayManager.loadDisplays(Datastore store) Load saved DisplayWindows for the given Datastore, which is assumed to represent data that is saved on disk.
boolean	DisplayManager.promptToSave(Datastore store, DisplayWindow display) Display a prompt for the user to save their data.