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Difference between revisions of "Plugins"

 
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* [[ASIdiSPIM Plugin]]
 
* [[ASIdiSPIM Plugin]]
 
* [http://www.asiimaging.com/docs/asi_gamepad ASI (XBox) Gamepad]
 
* [http://www.asiimaging.com/docs/asi_gamepad ASI (XBox) Gamepad]
 +
* [[AssembleData]]
 
* [[AutoLase]]
 
* [[AutoLase]]
 
* [[DLLAutoReloader]]
 
* [[DLLAutoReloader]]
* [[HCS Site Generator]]  
+
* [[EMU]]
 
* [[Flat-Field Correction]]
 
* [[Flat-Field Correction]]
 
* [[FrameProcessor]] : Perform live frames image processing.
 
* [[FrameProcessor]] : Perform live frames image processing.
 +
* [[HCS Site Generator]]
 
* [[Intelligent Acquisition]]
 
* [[Intelligent Acquisition]]
 
* [[Image Flipper]]
 
* [[Image Flipper]]
* [[Localization Microscopy]]
 
* [[Pixel Calibrator Plugin|Pixel Calibrator]]
 
 
* [[Live Replay]]
 
* [[Live Replay]]
* [[Tracker Plugin|Live Tracking]]
+
* [[Localization Microscopy]]
 
* [[MicroMagellan]]
 
* [[MicroMagellan]]
 
* [[Mightex Polygon Plugin|Mightex Polygon]]
 
* [[Mightex Polygon Plugin|Mightex Polygon]]
 
* [[Multi-Andor Control]]
 
* [[Multi-Andor Control]]
 
* [[MultiChannelShading]]
 
* [[MultiChannelShading]]
 +
* [[Pixel Calibrator Plugin|Pixel Calibrator]]
 +
* [[Point and Shoot Analysis]]
 
* [[PM/QI Auto White Balance]]
 
* [[PM/QI Auto White Balance]]
 +
* [[Photon Transfer Curve Assistant]]
 
* [[Projector]]
 
* [[Projector]]
 
* [[Slide Explorer Plugin|Slide Explorer]]
 
* [[Slide Explorer Plugin|Slide Explorer]]
 
* [[SplitView]]
 
* [[SplitView]]
 
* [[Stage Control]]
 
* [[Stage Control]]
 +
* [[Tracker Plugin|Live Tracking]]
  
 
In addition, plugins are available from third parties:
 
In addition, plugins are available from third parties:
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** [[Well Plate Plugin|Multiwell Plate Class]]
 
** [[Well Plate Plugin|Multiwell Plate Class]]
 
** [[3D_Deconvolution|3D Deconvolution]]
 
** [[3D_Deconvolution|3D Deconvolution]]
 +
** [https://github.com/kbellve/MMrestServer Remote interfacing (REST server)]
 
* [http://flybrain.mrc-lmb.cam.ac.uk/dokuwiki/doku.php?id=alex:projects:fluorescent_imaging:start Firewire camera/LED synchronization, by Alex Hodge, Cambridge]
 
* [http://flybrain.mrc-lmb.cam.ac.uk/dokuwiki/doku.php?id=alex:projects:fluorescent_imaging:start Firewire camera/LED synchronization, by Alex Hodge, Cambridge]
 
* [http://www.mediacy.com/index.aspx?page=IP_MicroManager_plugin Import Micro-Manager data into Image-Pro]
 
* [http://www.mediacy.com/index.aspx?page=IP_MicroManager_plugin Import Micro-Manager data into Image-Pro]

Latest revision as of 08:59, 8 July 2020

Micro-Manager offers a number of built-in Plugins for special applications in microscopy:

In addition, plugins are available from third parties:

See also Writing plugins for Micro-Manager

And also look at our paper describing hardware synchronization, simultaneous use of multiple cameras, projection of patterned light onto a specimen, live slide mapping, imaging with multi-well plates, particle localization and tracking, and high-speed imaging.

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