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Revision as of 10:01, 15 July 2014 by Mark Tsuchida (Talk | contribs)

(Previous releases)

Micro-Manager 1.4.17 (April 30, 2014)

Windows 32-bit, 55 MB
Windows 64-bit, 57 MB

Mac OS X (Universal Binary), 43 MB
(Note for OS X 10.8 or later: if the application does not open when double-clicked for the first time, try ctrl-click or right click, then select "Open".)

Known issues in 1.4.17

  • On Windows, connecting to devices that use a Silicon Labs USB-serial chip may result in a crash or error message. Affected devices include ASI stage controllers (when connected via USB) and certain USB-serial adapters. If you experience this, replace the mmgr_dal_SerialManager.dll file in the Micro-Manager folder with the version available here (for 32-bit MM) or here (for 64-bit MM).
  • On OS X 10.8 or later, when opening ImageJ64.app, you may get an error message saying that the application is "damaged". If so, you need to temporarily enable the following setting while opening the application for the first time: System Preferences > Security & Privacy > General > Allow applications downloaded from > Anywhere. Once opened successfully, the error should go away even if you switch back the security setting.

Changes in 1.4.17 (since 1.4.16)

  • New in the main application
    • Make Tile Creator ("Create Grid") use the correct stages (Nico Stuurman)
    • Tile Creator "Center Here" button no longer immediately closes the dialog (Chris Weisiger)
    • Fix bug in position list where removing multiple positions could cause the wrong positions to be removed (Chris Weisiger)
    • Plugins menu is now organized into categories, sorted alphabetically, and has improved tooltips (Nico Stuurman, Mark Tsuchida)
    • New "Report Problem" interface (Mark Tsuchida)
    • Script Panel has improved syntax highlighting, line numbers, and code folding (Nico Stuurman)
    • Make "display fps" reflect reality (Nico Stuurman)
    • Fix bug that caused some debug logging entries to be logged even when debug logging is off (Mark Tsuchida)
    • Fix a memory leak that could occur during long sequence acquisitions (Mark Tsuchida)
    • MAC address enumeration issue on Linux is fixed (Erik Hvatum)
    • Add cancel button to splash screen (Nico Stuurman)
    • Various bigfixes and minor enhancements (Nico Stuurman, Henry Pinkard, Arthur Edelstein, Chris Weisiger, Mark Tsuchida)
  • New plugins
    • Acquire Multiple Regions Automatically acquire multiple regions of a sample (Kurt Thorn)
    • AutoLase: Real-time closed-loop control of density of photoactivated molecules during PALM measurement (Thomas Pengo, Seamus Holden)
    • Live Tracking (revived): Use image correlation to countersteer the XY stage (Nico Stuurman, Mark Tsuchida)
    • pgFocus: Control the pgFocus open-source software/hardware focus stabilization device (Karl Bellve)
  • Updated plugins
    • ASIdiSPIM: Numerous enhancements (Jon Daniels, ASI; Nico Stuurman)
    • BFCorrector: Fix handling of 16-bit pixels; marked BFCorrector as obsolete as it is superseded by MultiChannelShading
    • Multi-Channel Shading: Fix crash when defining new groups (Kurt Thorn)
    • Projector: Enhancements to ROI support (Arthur Edelstein)
    • Stage Control: Wait for device to finish movement before updating displayed position (Nico Stuurman)
  • New device adapters
    • CONEX: Newport CONEX-CC DC-Servo Controller (Newport)
    • IIDC: IIDC 1394 cameras (future replacement for dc1394, currently monochrome only) (Mark Tsuchida)
    • MoticCamera (new on OS X): Motic cameras (Motic)
    • ObjectiveImaging: Objective Imaging OASIS controller (Egor Zindy)
    • pgFocus: pgFocus (open-source software/hardware focus stabilization device) (Karl Bellve)
    • PICAM: Princeton Instruments cameras, using the PICAM SDK (Toshio Suzuki)
    • ThorlabsAPTStage: Thorlabs APT family linear stages (a newly extended version of ThorlabsDCStage) (Egor Zindy)
    • ThorlabsMFC1: Thorlabs MFC1 Motorized Microscope Focus Controller (Thomas Zangle)
  • New closed-source device adapters
    • Mosaic3: Andor Mosaic 3 Digital Mirror Device (Arthur Edelstein for Andor)
  • Updated device adapters
    • Andor: Fix actual interval property and error during external trigger; Fix spurious noise filter control (Matthew Milford, Andor)
    • AndorLaserCombiner: Add SaveLifetime and IsLinear properties; allow TTL option in Enable property (Pariksheet Nanda)
    • AndorSDK3: Add support for Auxiliary Out TTL I/O pin; Linux support; various bugfixes (Norman Glasgow, Andor; Erik Hvatum)
    • ASITiger: Add property to reverse axis directions and interchange X and Y; various fixes and minor enhancements (Jon Daniels, ASI)
    • IDS_uEye: Add color support, bit depth selection, and external trigger; improve binning support (Wenjamin Rosenfeld)
    • NikonTE2000: Fix Uniblitz shutter support (Mark Tsuchida)
    • PCO_Camera: Fixed time setting, ROI, and binning issues; tested simultaneous full-fps acquisition with two pco.edge_4.2 using Multi Camera; various bugfixes (Franz Reitner, PCO)
    • PI_GCS_2: Add support for C-865 and E-816 (E-665, E-625, E-621) with firmware < 2.11; added E-709 and C-884 as preconfigured controller; default axis names are now "1" and "2"; fixed hang with C-867.262; other fixes and enhancements (Steffen Rau, Physik Instrumente)
    • Piper: Reinstated (was missing from 1.4.16 due to build compatibility issues); improved handling of property updates (Terry Sprout for Stanford Photonics)
    • PVCAM: Add ExposeOutMode property; support new trigger modes for OptiMos; various fixes; OptiMos users should update to PVCAM 3.0.1.2 (Lubomir Walder, Photometrics)
    • ThorlabsDCStage: See new ThorlabsAPTStage
    • TISCam: Support Y16 mode; add white balance red/blue properties (Falk Dettmer)
    • XCiteLed: Fix issue caused by comma in property name (Mark Tsuchida)
    • XIMEA: Fix bit depth reported by camera (Egor Zindy)
    • XLight: Fixes and enhancements (Enzo Chiarappa, Crestoptics)
    • ZeissCAN: Add StepSize property to XYStage (Nico Stuurman)
    • ZeissCAN29: Add ND filter wheel support; change condenser position limit from 7 to 8 (Nico Stuurman)
  • Updated closed-source device adapters
    • HamamatsuHam: Added support for Defect Correct Mode (Patrick Gregorio, Hamamatsu)
    • NikonTI: No longer crash when loading DiaLamp (remaining bug: config may need to be loaded twice) (Mark Tsuchida)
  • Retired device adapters
    • Hamamatsu on Windows: Please use HamamatsuHam instead
  • Changes to the scripting API
    • createAcquisition() is deprecated (use openAcquisition())
    • getAcquisition(), getAcqDlg(), and getXYPosListDlg() are deprecated
    • getAcqusitionSettings() (sic.) is now getAcquisitionSettings()
    • propmtToSaveAcqusition() (sic.) is now promptToSaveAcquisition()
    • Deleted previously deprecated methods.
  • Changes to the MMCore API
    • Added overloads of getShutterOpen() and setShutterOpen() that take the shutter device label as an argument
    • Three methods now throw CMMError: definePixelSizeConfig() (two overloaded methods), isPixelSizeConfigDefined()
  • Changes to the MMDevice API
    • None
  • Changes of interest to developers
    • Micro-Manager 1.4.17 is SVN r13272, 3rdpartypublic r163
    • The paths from which to load the MMCoreJ_wrap native library and device adapters are now configurable; the default for device adapters is the directory containing the MMCoreJ_wrap or MMCorePy_wrap library (Mark Tsuchida)
    • Fixed loading of MMCoreJ_wrap native library when running on Java 7 on OS X (Mark Tsuchida)
    • Unix build scripts (using GNU build system) have been substantially updated (Mark Tsuchida)
    • Unix 'make install' can create launch script (Mark Tsuchida)
    • MMCorePy built on OS X or Linux is no longer broken (Mark Tsuchida)
    • Mac OS X binaries are now built with Xcode 5.x (previously 3.2) (Mark Tsuchida)
    • Mac OS X binaries no longer contain PowerPC support (Mark Tsuchida)
    • Visual studio 2010 Debug builds of MMCoreJ_wrap.dll should now work on computers that do not have Visual Studio 2008 installed (Mark Tsuchida)
    • Communication over FTDI USB-serial interface now sends 1 USB packet per message, rather than breaking up messages into bytes (Mark Tsuchida)


(Previous releases)

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